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1

Early life dynamics of the human gut virome and bacterial microbiome in infants

Lim, Efrem S, Zhou, Yanjiao, Zhao, Guoyan, Bauer, Irma K, Droit, Lindsay, Ndao, I Malick, Warner, Barbara B, Tarr, Phillip I, Wang, David, Holtz, Lori R

Journal:

Nature Medicine

Year:

2015

Language:

english

File:

PDF, 996 KB

english, 2015

2

Discovery of STL polyomavirus, a polyomavirus of ancestral recombinant origin that encodes a unique T antigen by alternative splicing

Lim, Efrem S., Reyes, Alejandro, Antonio, Martin, Saha, Debasish, Ikumapayi, Usman N., Adeyemi, Mitchell, Stine, O. Colin, Skelton, Rebecca, Brennan, Daniel C., Mkakosya, Rajhab S., Manary, Mark J., G

Journal:

Year:

2013

Language:

english

File:

PDF, 800 KB

english, 2013

3

Complete Genome Sequence of Torque teno indri virus 1 , a Novel Anellovirus in Blood from a Free-Living Lemur

Amatya, Rina, Deem, Sharon L., Porton, Ingrid J., Wang, David, Lim, Efrem S.

Journal:

Genome Announcements

Year:

2017

Language:

english

File:

PDF, 138 KB

english, 2017

4

What Do We Know About the Macroeconomic Effects of Fiscal Policy? A Brief Survey of the Literature on Fiscal Multipliers

Castelnuovo, Efrem, Lim, Guay

Journal:

Australian Economic Review

Year:

2019

File:

PDF, 429 KB

2019

5

The Ability of Primate Lentiviruses to Degrade the Monocyte Restriction Factor SAMHD1 Preceded the Birth of the Viral Accessory Protein Vpx

Efrem S. Lim, Oliver I. Fregoso, Connor O. McCoy, Frederick A. Matsen, Harmit S. Malik, Michael Emerman

Journal:

Cell Host & Microbe

Year:

2012

Language:

english

File:

PDF, 1.35 MB

english, 2012

6

The function and evolution of the restriction factor viperin in primates was not driven by lentiviruses

Efrem S Lim, Lily I Wu, Harmit S Malik, Michael Emerman

Journal:

Year:

2012

Language:

english

File:

PDF, 631 KB

english, 2012

7

HIV: Going for the watchman

Lim, Efrem S., Emerman, Michael

Journal:

Year:

2011

Language:

english

File:

PDF, 955 KB

english, 2011

8

Discovery of rosavirus 2, a novel variant of a rodent-associated picornavirus, in children from The Gambia

Lim, Efrem S., Cao, Song, Holtz, Lori R., Antonio, Martin, Stine, O. Colin, Wang, David

Journal:

Year:

2014

Language:

english

File:

PDF, 843 KB

english, 2014

9

Corrigendum to “Discovery of STL polyomavirus, a polyomavirus of ancestral recombinant origin that encodes a unique T antigen by alternative splicing” [Virology 436 (2) (2013) 295–303]

Lim, Efrem S., Reyes, Alejandro, Antonio, Martin, Saha, Debasish, Ikumapayi, Usman N., Adeyemi, Mitchell, Stine, O. Colin, Skelton, Rebecca, Brennan, Daniel C., Mkakosya, Rajhab S., Manary, Mark J., G

Journal:

Year:

2013

Language:

english

File:

PDF, 191 KB

english, 2013

10

Synthesis and characterization of dithienobenzothiadiazole-based donor–acceptor conjugated polymers for organic solar cell applications

Efrem, Amsalu, Lim, Chia-Juan, Lu, Yong, Ng, Siu-Choon

Journal:

Tetrahedron Letters

Year:

2014

Language:

english

File:

PDF, 643 KB

english, 2014

11

Species-Specific Transmission of Novel Picornaviruses in Lemurs

Lim, Efrem S., Deem, Sharon L., Porton, Ingrid J., Cao, Song, Wang, David, Kirkegaard, K.

Journal:

Journal of Virology

Year:

2015

Language:

english

File:

PDF, 1.12 MB

english, 2015

12

Common Exposure to STL Polyomavirus During Childhood

Lim, Efrem S., Meinerz, Natalie M., Primi, Blake, Wang, David, Garcea, Robert L.

Journal:

Emerging Infectious Diseases

Year:

2014

Language:

english

File:

PDF, 445 KB

english, 2014

13

Altered Virome and Bacterial Microbiome in Human Immunodeficiency Virus-Associated Acquired Immunodeficiency Syndrome

Monaco, Cynthia L., Gootenberg, David B., Zhao, Guoyan, Handley, Scott A., Ghebremichael, Musie S., Lim, Efrem S., Lankowski, Alex, Baldridge, Megan T., Wilen, Craig B., Flagg, Meaghan, Norman, Jason

Journal:

Cell Host & Microbe

Year:

2016

Language:

english

File:

PDF, 2.23 MB

english, 2016

14

The Bacterial Microbiome and Virome Milestones of Infant Development

Lim, Efrem S., Wang, David, Holtz, Lori R.

Journal:

Trends in Microbiology

Year:

2016

Language:

english

File:

PDF, 1.55 MB

english, 2016

15

Introduction to the Policy Forum: Macroeconomic Consequences of Macroprudential Policies

Castelnuovo, Efrem, Lim, Guay, Robinson, Tim

Journal:

Australian Economic Review

Year:

2016

Language:

english

File:

PDF, 75 KB

english, 2016

16

VirusSeeker, a computational pipeline for virus discovery and virome composition analysis

Zhao, Guoyan, Wu, Guang, Lim, Efrem S., Droit, Lindsay, Krishnamurthy, Siddharth, Barouch, Dan H., Virgin, Herbert W., Wang, David

Journal:

Year:

2017

Language:

english

File:

PDF, 416 KB

english, 2017

17

Vpx overcomes a SAMHD1-independent block to HIV reverse transcription that is specific to resting CD4 T cells

Baldauf, Hanna-Mari, Stegmann, Lena, Schwarz, Sarah-Marie, Ambiel, Ina, Trotard, Maud, Martin, Margarethe, Burggraf, Manja, Lenzi, Gina M., Lejk, Helena, Pan, Xiaoyu, Fregoso, Oliver I., Lim, Efrem S.

Journal:

Proceedings of the National Academy of Sciences

Year:

2017

Language:

english

File:

PDF, 939 KB

english, 2017

18

A Short Review of the Recent Literature on Uncertainty

Castelnuovo, Efrem, Lim, Guay, Pellegrino, Giovanni

Journal:

Australian Economic Review

Year:

2017

Language:

english

File:

PDF, 105 KB

english, 2017

19

Statoviruses, A novel taxon of RNA viruses present in the gastrointestinal tracts of diverse mammals

Janowski, Andrew B., Krishnamurthy, Siddharth R., Lim, Efrem S., Zhao, Guoyan, Brenchley, Jason M., Barouch, Dan H., Thakwalakwa, Chrissie, Manary, Mark J., Holtz, Lori R., Wang, David

Journal:

Year:

2017

Language:

english

File:

PDF, 968 KB

english, 2017

20

A Snapshot of Antibody-Mediated Rejection Goes Viral

Lim, Efrem S., Brennan, Daniel C.

Journal:

Transplantation Journal

Year:

2017

Language:

english

File:

PDF, 93 KB

english, 2017

21

An Intracellular Pathogen Response Pathway Promotes Proteostasis in C. elegans

Reddy, Kirthi C., Dror, Tal, Sowa, Jessica N., Panek, Johan, Chen, Kevin, Lim, Efrem S., Wang, David, Troemel, Emily R.

Journal:

Current Biology

Year:

2017

Language:

english

File:

PDF, 1.75 MB

english, 2017

22

Macroeconomic Policies in a Low Interest Rate Environment: Back to Keynes?

Castelnuovo, Efrem, Lim, Guay, Pellegrino, Giovanni

Journal:

Australian Economic Review

Year:

2018

Language:

english

File:

PDF, 479 KB

english, 2018

23

Characterization of BK Polyomaviruses from Kidney Transplant Recipients Suggests a Role for APOBEC3 in Driving In-Host Virus Evolution

Peretti, Alberto, Geoghegan, Eileen M., Pastrana, Diana V., Smola, Sigrun, Feld, Pascal, Sauter, Marlies, Lohse, Stefan, Ramesh, Mayur, Lim, Efrem S., Wang, David, Borgogna, Cinzia, FitzGerald, Peter

Journal:

Cell Host & Microbe

Year:

2018

Language:

english

File:

PDF, 2.29 MB

english, 2018

24

Expanded Enteric Virome and Altered Bacterial Microbiome in AIDS

Monaco, Cynthia, Gootenberg, David, Zhao, Guoyan, Lim, Efrem, Ghebremichael, Musie, Baldridge, Megan, Wilen, Craig, Handley, Scott, Flagg, Meaghan, Siedner, Mark, Norman, Jason, Keller, Brian, Lankows

Journal:

Open Forum Infectious Diseases

Year:

2015

Language:

english

File:

PDF, 29 KB

english, 2015

25

Amniotic fluid from healthy term pregnancies does not harbor a detectable microbial community

Lim, Efrem S., Rodriguez, Cynthia, Holtz, Lori R.

Journal:

Year:

2018

Language:

english

File:

PDF, 1002 KB

english, 2018

26

Seroprevalence of fourteen human polyomaviruses determined in blood donors

Kamminga, Sergio, van der Meijden, Els, Feltkamp, Mariet C. W., Zaaijer, Hans L., Lim, Efrem

Journal:

Year:

2018

Language:

english

File:

PDF, 1.75 MB

english, 2018

27

Characteristics of the tree shrew gut virome

Chen, Linxia, Gu, Wenpeng, Liu, Chenxiu, Wang, Wenguang, Li, Na, Chen, Yang, Lu, Caixia, Sun, Xiaomei, Han, Yuanyuan, Kuang, Dexuan, Tong, Pinfen, Dai, Jiejie, Lim, Efrem

Journal:

Year:

2019

Language:

english

File:

PDF, 7.01 MB

english, 2019

28

Prevalence of Epstein-Barr virus, human papillomavirus, cytomegalovirus and herpes simplex virus type 1 in patients with diabetes mellitus type 2 in south-eastern Poland

Dworzański, Jakub, Drop, Bartłomiej, Kliszczewska, Ewa, Strycharz-Dudziak, Małgorzata, Polz-Dacewicz, Małgorzata, Lim, Efrem

Journal:

Year:

2019

Language:

english

File:

PDF, 682 KB

english, 2019

29

Discordant transmission of bacteria and viruses from mothers to babies at birth

Maqsood, Rabia, Rodgers, Rachel, Rodriguez, Cynthia, Handley, Scott A., Ndao, I. Malick, Tarr, Phillip I., Warner, Barbara B., Lim, Efrem S., Holtz, Lori R.

Journal:

Year:

2019

File:

PDF, 1.13 MB

2019

30

An 81 nucleotide deletion in SARS-CoV-2 ORF7a identified from sentinel surveillance in Arizona (Jan-Mar 2020)

Holland, LaRinda A., Kaelin, Emily A., Maqsood, Rabia, Estifanos, Bereket, Wu, Lily I., Varsani, Arvind, Halden, Rolf U., Hogue, Brenda G., Scotch, Matthew, Lim, Efrem S.

Journal:

Journal of Virology

Year:

2020

File:

PDF, 1.09 MB

2020